MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
19428wD1_P36
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 72
bases: 2,716,488 bps
CDS: 2,494
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 2,564
Total number of protein coding genes annotated/found:
2,494
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5032|JADGLA010000007.1
SEQF5032_02444
Genome Viewer
NA
AA
366/122
26500-26135
hypothetical protein
SEQF5032|JADGLA010000007.1
SEQF5032_02445
Genome Viewer
NA
AA
423/141
27064-26642
Protein hit
SEQF5032|JADGLA010000007.1
SEQF5032_02446
Genome Viewer
NA
AA
741/247
27198-27938
ABC-type transporter ATP-binding protein EcsA
SEQF5032|JADGLA010000007.1
SEQF5032_02447
Genome Viewer
NA
AA
1224/408
27931-29154
hypothetical protein
SEQF5032|JADGLA010000007.1
SEQF5032_02448
Genome Viewer
NA
AA
504/168
29781-29278
Signal transduction protein TRAP
SEQF5032|JADGLA010000007.1
SEQF5032_02449
Genome Viewer
NA
AA
1038/346
30044-31081
Uroporphyrinogen decarboxylase
SEQF5032|JADGLA010000007.1
SEQF5032_02450
Genome Viewer
NA
AA
924/308
31139-32062
Ferrochelatase
SEQF5032|JADGLA010000007.1
SEQF5032_02451
Genome Viewer
NA
AA
1401/467
32086-33486
Protoporphyrinogen oxidase
SEQF5032|JADGLA010000007.1
SEQF5032_02452
Genome Viewer
NA
AA
555/185
33807-34361
Putative hydrolase YdeN
SEQF5032|JADGLA010000007.1
SEQF5032_02461
Genome Viewer
NA
AA
936/312
36491-37426
Leucotoxin LukEv
SEQF5032|JADGLA010000007.1
SEQF5032_02462
Genome Viewer
NA
AA
984/328
37428-38411
Leucotoxin LukDv
SEQF5032|JADGLA010000007.1
SEQF5032_02463
Genome Viewer
NA
AA
222/74
38559-38780
hypothetical protein
SEQF5032|JADGLA010000007.1
SEQF5032_02464
Genome Viewer
NA
AA
792/264
39558-38767
hypothetical protein
SEQF5032|JADGLA010000007.1
SEQF5032_02465
Genome Viewer
NA
AA
474/158
40036-39563
hypothetical protein
SEQF5032|JADGLA010000007.1
SEQF5032_02466
Genome Viewer
NA
AA
219/73
40292-40510
hypothetical protein
SEQF5032|JADGLA010000007.1
SEQF5032_02467
Genome Viewer
NA
AA
582/194
41564-40983
hypothetical protein
SEQF5032|JADGLA010000007.1
SEQF5032_02468
Genome Viewer
NA
AA
708/236
42528-43235
Serine protease SplA
SEQF5032|JADGLA010000007.1
SEQF5032_02469
Genome Viewer
NA
AA
723/241
43360-44082
Serine protease SplB
SEQF5032|JADGLA010000007.1
SEQF5032_02470
Genome Viewer
NA
AA
723/241
44140-44862
Serine protease SplB
SEQF5032|JADGLA010000007.1
SEQF5032_02471
Genome Viewer
NA
AA
720/240
44920-45639
Serine protease SplC
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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